Microbiology Laboratory


Written by MicroDok

Blood culture is the most important diagnostic method for detecting and diagnosing bacteraemia and fungimia in the clinical microbiology laboratory. Blood specimen required for blood culture technique should be collected from the patient prior to antibiotic therapy in order to increase the sensitivity of the test. This is important because prior antibiotic therapy before the drawing of blood for blood culture reduces the effectiveness of the test. It is therefore a general rule to collect blood samples for blood culture techniques before the initiation of antibiotic therapy. However, this is not always the case especially in critically ill patients due to high rate of mortality associated with delayed treatment. In such patients, blood can be drawn prior to or after antibiotic therapy in order to avoid any fatality. Nevertheless, most blood culture media contain substances that help to inhibit the onslaught of antibiotics present in the collected blood for blood culture analysis. Different blood culture medium exist, and they each support anaerobic bacteria, facultative or aerobic bacteria.

AIM: To isolate and identify the presence of pathogenic bacteria in blood specimen as an aid in the diagnosis of bacteraemia and septicaemia.

MATERIAL/APPARATUS:  Blood specimen (about 10 ml), incubator, blood culture medium (e.g. Oxoid signal  blood culture system & medium), blood agar (BA), chocolate agar (CA), cystein lactose – electrolyte deficient (CLED) agar, inoculating loop, Bunsen burner, grease pencil, 70% ethanol, cotton wool. It should be noted that there are several blood culture medium available for blood culture. The type of blood culture medium used is left to the discretion of the researcher and the type of bacteria being isolated (anaerobic, aerobic or facultative organisms).


  1. Remove the protective cover from the top of the blood culture bottle.
  2. Clean/wipe the top of the blood culture bottle with a cotton swab of ethanol.
  3. Aseptically dispense the 10 ml of blood into the blood culture medium blood.
  4. Clean the top of the blood culture bottle medium with cotton swab of ethanol after dispensing or inoculating the blood specimen.
  5. Shake the blood culture bottle to mix the blood with the broth.
  6. Replace the culture signal device above the top of the blood culture bottle.
  7. Label the blood culture bottle with the patient’s name and number using a grease pencil.
  8. Incubate the inoculated blood culture bottle in the incubator at 37oC for 7 days.
  9. Examine the incubated blood culture bottle at intervals. Terminal subcultures can also be done before the 7 days elapses using CA, CLED, and BA agar plates.
  10. Perform a Gram stain to determine if the bacteria are either Gram positive or Gram negative.
  11. Then aseptically subculture an aliquot (the contents of the growth indicator device of the blood culture bottle) on relevant agar plates (e.g. CLED, BA, and CA) to look out for bacterial growth.
  12. Incubate the CLED & BA plates in the incubator at 37oC overnight.
  13. Incubate the CA plate in a carbon dioxide enriched atmosphere (e.g. anaerobic jar). The reason for this is to provide about 5 – 10% CO2 for the luxuriant growth of anaerobes present in the specimen.
  14. Examine plates for bacterial growth.
  15. Conduct biochemical tests and gram staining, and Perform antimicrobial susceptibility test only when a pathogen is successfully isolated and identified.


Always report immediately a positive blood culture, and send a preliminary report of the stained smear and other useful test results to the physician in charge of the patient. This is very important as it is known that our blood does not have even a single normal microbial flora unlike other parts of the human body like the skin that are flooded with a wide variety of normal microbial flora. Presence of bacteria in the blood is indicative of a pathological/disease state. Report any pathogen that is isolated.

Bacteraemia is defined as the presence of bacteria in the blood. It is usually pathological (i.e. indicative of a serious disease) although transitory asymptomatic bacteraemia can occur during the course of many infections and after a surgical operation have been undertaken. Bacteraemia usually occurs in such diseases as: typhoid fever, endocarditis, and brucellosis.

Septicaemia is defined as a severe life – threatening bacteraemia. In septicaemic conditions, there is a large amount of bacteria in the blood, and these bacteria release toxins into the blood stream. These toxins trigger the production of cytokines, causing fever, low blood pressure, toxicity, and even collapse. A complication of septicemia is septic shock. Prompt treatment is essential. 

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