Bacteriology is simply defined as the scientific study of bacteria. For the purpose of this book, only pathogenic bacteria (i.e. those bacteria that cause diseases and infections in humans) shall be the prime focus of this chapter. Pathogenic bacteriology thus, is the scientific study of bacteria that cause diseases in man. This unit which is one of the most important units of the clinical microbiology laboratory handles different types of patient’s specimens, with the sole aim of growing and isolating pathogenic bacteria from clinical specimens so that treatment can be properly administered by the physician. The proper and adequate isolation and growth of bacteria for which this unit is known for, are required before any biochemical tests can be used to confirm the identification of the pathogen isolated. It was said in the preceding pages of this work that the sole aim of the clinical microbiologist is to isolate and grow pathogens from host tissue and specimens so as to define the cause of an infectious disease which has taken hold of a patient. This is indeed true as it will be expanded in this chapter how the clinical microbiologist goes about achieving this prime aim.
The direct physical and microscopic examinations of the smears of patient’s specimens and other environmental samples cannot be sufficient enough to characterize and identify specifically the different species of microorganisms present in the sample. Thus it is paramount to undertake specific identification techniques in identifying the species of bacteria in the specimen using cultural technique. The presence of bacterial growth in the microbiology laboratory can be usually recognized by the development of colonies on solid media or turbidity/cloudiness in liquid media (broth). Cultivation is defined as the process of propagating/growing organisms (e.g. bacteria) in the laboratory by providing them with the proper and adequate environmental conditions needed for their growth. In a more general term, this process also means culture/culturing of microorganisms.
To grow or culture a microorganism simply means to make replicas of the microorganism, and doing this requires the microbiologist to provide all the needed nutrients with which the growth of the organism can be propagated. The technique of doing this in the laboratory is called culture technique, and this is one of the most significant techniques that differentiate the clinical microbiology laboratory from other laboratories like hematology, clinical chemistry e.t.c in a hospital setting. It is a major technique in the clinical microbiology laboratory by which the causative agent of a particular disease can be defined. The culture of a microorganism is carried out in a solid or liquid medium which is totally made sterile (i.e. free from all microorganism). The culture media plate is then inoculated with a specimen or an organism and then incubated at a specific temperature and time that supports growth of the microorganism. A pure culture (which is a culture that contains only a single kind of organism) which is usually free from any form of contaminating microorganism is finally recovered from the culture media plate after incubation. The isolated pure culture is then further tested biochemically and molecularly in order to identify and characterize them.
Apart from demonstrating the presence of a pathogen which may be causing a particular disease, the cultural technique in microbiology also helps to provide a platform via which microorganisms can be studied in a more accurate way based on their different growth patterns on culture media. It also enables colonies of pure bacterial growth to be isolated for further identification, biochemical, immunological, and antimicrobial susceptibility testing’s. Microorganisms vary widely in their nutritional demands/requirements and their sources of metabolic energy. Thus there are also a wide variety of media (microorganism’s food) available for the proper isolation of bacteria depending on the type of bacteria to be isolated. Enjoy yourself!